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Apprendre Challenge: Manipulating Genomic Data | Reproducible and Genomic-Style Analysis
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R for Biologists and Bioinformatics

bookChallenge: Manipulating Genomic Data

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Write a function that takes a gene expression matrix, a vector of gene names, and a vector of sample names, and returns both the subsetted matrix and a vector of average expression values for each selected gene across the selected samples.

  • Subset the input matrix to include only the specified genes (rows) and samples (columns).
  • Calculate the average expression value for each selected gene across the selected samples.
  • Return a list containing the subsetted matrix and the vector of average expression values.

Solution

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Section 4. Chapitre 2
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bookChallenge: Manipulating Genomic Data

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Tâche

Swipe to start coding

Write a function that takes a gene expression matrix, a vector of gene names, and a vector of sample names, and returns both the subsetted matrix and a vector of average expression values for each selected gene across the selected samples.

  • Subset the input matrix to include only the specified genes (rows) and samples (columns).
  • Calculate the average expression value for each selected gene across the selected samples.
  • Return a list containing the subsetted matrix and the vector of average expression values.

Solution

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Tout était clair ?

Comment pouvons-nous l'améliorer ?

Merci pour vos commentaires !

Section 4. Chapitre 2
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single

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